Publications

Interpretable agentic AI system with localized reasoning for radiology

Wenting Chen, Yi Dong, Zhaojun Ding, Yucheng Shi, Fang Zeng, Yifan Zhou, Huaqin Zhao, Yijun Luo, Tianyu Lin, Yihang Su, Yichen Wu, Jasmine Liu, Kai Zhang, Wenxuan Wang, Zhen Xiang, Tianming Liu, Ninghao Liu, Quanzheng Li, Lichao Sun^†, Yixuan Yuan^†, Xiang Li^†

npj Digital Medicine 2026

GenEyePose: Patient-Free, Knowledge-Based Saccadic Eye Movement Modeling for Digital Neurophysiologic Biomarker Development

Tianyu Lin, Jooyoung Ryu, Puvada Sreevarsha, Rahul Srinivasaragavan, Riya Satavlekar, Susan Kim, Nidhi Soley, Yujie Yan, Ishan Vatsaraj, Carl Harris, Aimon Rahman, Vishal Patel, Joseph Greenstein, Casey Taylor, Kemar E. Green^†

arXiv preprint arXiv:2606.09681 2026

Building a saccade screening tool without any private patient data

Text-Driven Tumor Synthesis

Xinran Li, Yi Shuai, Chen Liu, Qi Chen, Tianyu Lin, Pengfei Guo, Dong Yang, Can Zhao, Pedro R. A. S. Bassi, Daguang Xu, Kang Wang, Yang Yang, Alan L. Yuille, Zongwei Zhou^†

IEEE Transactions on Medical Imaging 2026

Diversified Composite Prompting to Enhance Generalisation of Vision‐Language Models

Xiaoyong Mei, Chong Tang, Zhengqun Dai^†, Fudan Zheng, Kongwen Zhang, Tianyu Lin

CAAI Transactions on Intelligence Technology 2026

Evaluating Large Language Models in Crisis Detection: A Real-World Benchmark from Psychological Support Hotlines

Guifeng Deng, Shuying Rao, Tianyu Lin, Anlu Dai, Pan Wang, Junyi Xie, Yue Pan, Ke Zhao, Dongwu Xu, Zhengdong Cheng, Tao Li^†, Haiteng Jiang^†

IEEE Journal of Biomedical and Health Informatics 2026

Early and Prediagnostic Detection of Pancreatic Cancer from Computed Tomography

Wenxuan Li, Pedro R. A. S. Bassi, Lizhou Wu, Xinze Zhou, Yuxuan Zhao, Qi Chen, Szymon Plotka, Tianyu Lin, Zheren Zhu, Marisa Martin, Justin Caskey, Shanshan Jiang, Xiaoxi Chen, Jaroslaw B. Ćwikla, Artur Sankowski, Yaping Wu, Sergio Decherchi, Andrea Cavalli, Chandana Lall, Cristian Tomasetti, Yaxing Guo, Xuan Yu, Yuqing Cai, Hualin Qiao, Jie Bao, Chenhan Hu, Ximing Wang, Arkadiusz Sitek, Kai Ding, Heng Li, Meiyun Wang^†, Dexin Yu^†, Guang Zhang^†, Yang Yang^†, Kang Wang^†, Alan L. Yuille^†, Zongwei Zhou^†

arXiv preprint arXiv:2601.22134 2026

Are Pixel-Wise Metrics Reliable for Sparse-View Computed Tomography Reconstruction?

Tianyu Lin, Xinran Li, Chuntung Zhuang, Qi Chen, Yuanhao Cai, Kai Ding, Alan L. Yuille, Zongwei Zhou^†

The Thirty-ninth Annual Conference on Neural Information Processing Systems (NeurIPS 2025), RSNA 2025 Oral 2025

It's time to evaluate anatomical completeness in CT reconstruction!

Expectation-Maximization as the Engine of Scalable Medical Intelligence

Wenxuan Li, Pedro R. A. S. Bassi, Tianyu Lin, Yu-Cheng Chou, Jakob Wasserthal, Xinze Zhou, Qi Chen, Fabian Isensee, Yannick Kirchhoff, Maximilian Rokuss, Saikat Roy, Constantin Ulrich, Klaus Maier-Hein, Szymon Płotka, Xiaoxi Chen, Kang Wang, Yang Yang, Daguang Xu, Kai Ding, Yucheng Tang, Alan L. Yuille, Zongwei Zhou^†

arXiv preprint arXiv:2501.03410 2025

ScaleMAI: Accelerating the development of trusted datasets and ai models

PGP-SAM: Prototype-Guided Prompt Learning for Efficient Few-Shot Medical Image Segmentation

Zhonghao Yan, Zijin Yin, Tianyu Lin, Xiangzhu Zeng, Kongming Liang^†, Zhanyu Ma

2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI) 2025

A priority-guided contrastive network for delineating vascular layers in arterial ultrasound

Minhua Lu, Tianyu Lin, Weiyuan Lin^†, Zhaohui Li, Zhifan Gao

Expert Systems with Applications 2025

EMSSD: Two-Stage Model Enhancing Medical Image Segmentation Based on Stable Diffusion

Ruiyue Chen, Xin Zhang^†, Tianyu Lin, Sijin Yu

2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI 2025) 2025

PanTS: The Pancreatic Tumor Segmentation Dataset

Wenxuan Li, Xinze Zhou, Qi Chen, Tianyu Lin, Pedro R. A. S. Bassi, Szymon Plotka, Jaroslaw B. Cwikla, Xiaoxi Chen, Chen Ye, Zheren Zhu, Kai Ding, Heng Li, Kang Wang, Yang Yang, Yucheng Tang, Daguang Xu, Alan L. Yuille, Zongwei Zhou^†

The Thirty-ninth Annual Conference on Neural Information Processing Systems (NeurIPS 2025) Datasets and Benchmarks Track 2025

Learning Segmentation from Radiology Reports

Pedro R. A. S. Bassi, Wenxuan Li, Jieneng Chen, Zheren Zhu, Tianyu Lin, Sergio Decherchi, Andrea Cavalli, Kang Wang, Yang Yang, Alan L. Yuille, Zongwei Zhou^†

Medical Image Computing and Computer Assisted Intervention (MICCAI 2025) 2025

🏆 Best Paper Award Runner-up (top 2 in 1,027 papers)

LEAF: Latent Diffusion with Efficient Encoder Distillation for Aligned Features in Medical Image Segmentation

Qilin Huang, Tianyu Lin, Zhiguang Chen, Fudan Zheng^†

International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2025) 2025

See More, Change Less: Anatomy-Aware Diffusion for Contrast Enhancement

Junqi Liu, Zejun Wu, Pedro R. A. S. Bassi, Xinze Zhou, Wenxuan Li, Ibrahim E. Hamamci, Sezgin Er, Tianyu Lin, Yi Luo, Szymon Płotka, Bjoern Menze, Daguang Xu, Kai Ding, Kang Wang, Yang Yang, Yucheng Tang, Alan L. Yuille, Zongwei Zhou^†

arXiv preprint arXiv:2512.07251 2025

Stable diffusion segmentation for biomedical images with single-step reverse process

Tianyu Lin, Zhiguang Chen, Zhonghao Yan, Weijiang Yu^†, Fudan Zheng^†

International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2024) 2024

A single-step latent space diffusion segmentation model