Publications

A collection of my research work.

Are Pixel-Wise Metrics Reliable for Computerized Tomography Reconstruction?

Are Pixel-Wise Metrics Reliable for Computerized Tomography Reconstruction?

Tianyu Lin, Xinran Li, Chuntung Zhuang, Qi Chen, Yuanhao Cai, Kai Ding, Alan Yuille, Zongwei Zhou

The Thirty-ninth Annual Conference on Neural Information Processing Systems (NeurIPS 2025), RSNA 2025 Oral 2025

It's time to evaluate anatomical completeness in CT reconstruction!

PaperCodearXiv
Expectation-Maximization as the Engine of Scalable Medical Intelligence

Expectation-Maximization as the Engine of Scalable Medical Intelligence

Wenxuan Li, Pedro R. A. S. Bassi, Tianyu Lin, Yu-Cheng Chou, Jakob Wasserthal, Xinze Zhou, Qi Chen, Fabian Isensee, Yannick Kirchhoff, Maximilian Rokuss, Saikat Roy, Constantin Ulrich, Klaus Maier-Hein, Szymon Płotka, Xiaoxi Chen, Kang Wang, Yang Yang, Daguang Xu, Kai Ding, Yucheng Tang, Alan L. Yuille, Zongwei Zhou

arXiv preprint arXiv:2501.03410 2025

ScaleMAI: Accelerating the development of trusted datasets and ai models

ProjectCodearXiv
PGP-SAM: Prototype-Guided Prompt Learning for Efficient Few-Shot Medical Image Segmentation

PGP-SAM: Prototype-Guided Prompt Learning for Efficient Few-Shot Medical Image Segmentation

Zhonghao Yan, Zijin Yin, Tianyu Lin, Xiangzhu Zeng, Kongming Liang, Zhanyu Ma

2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI) 2025

PaperCodearXiv
A priority-guided contrastive network for delineating vascular layers in arterial ultrasound

A priority-guided contrastive network for delineating vascular layers in arterial ultrasound

Minhua Lu, Tianyu Lin, Weiyuan Lin, Zhaohui Li, Zhifan Gao

Expert Systems with Applications 2025

Paper
EMSSD: Two-Stage Model Enhancing Medical Image Segmentation Based on Stable Diffusion

EMSSD: Two-Stage Model Enhancing Medical Image Segmentation Based on Stable Diffusion

Ruiyue Chen, Xin Zhang, Tianyu Lin, Sijin Yu

2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI 2025) 2025

Paper

Evaluating Large Language Models in Crisis Detection: A Real-World Benchmark from Psychological Support Hotlines

Guifeng Deng, Shuyin Rao, Tianyu Lin, Anlu Dai, Pan Wang, Junyi Xie, Haidong Song, Ke Zhao, Dongwu Xu, Zhengdong Cheng, Tao Li, Haiteng Jiang

arXiv preprint arXiv:2506.01329 2025

arXiv
PanTS: The Pancreatic Tumor Segmentation Dataset

PanTS: The Pancreatic Tumor Segmentation Dataset

Wenxuan Li, Xinze Zhou, Qi Chen, Tianyu Lin, Pedro R. A. S. Bassi, Xiaoxi Chen, Chen Ye, Zheren Zhu, Kai Ding, Heng Li, Kang Wang, Yang Yang, Yucheng Tang, Daguang Xu, Alan Yuille, Zongwei Zhou

The Thirty-ninth Annual Conference on Neural Information Processing Systems (NeurIPS 2025) Datasets and Benchmarks Track 2025

ProjectPaperCodearXiv
EyePose: Pose-guided Saccadic Eye Movement Video Generation for Deep Learning-Based Neurologic Disease Phenotyping

EyePose: Pose-guided Saccadic Eye Movement Video Generation for Deep Learning-Based Neurologic Disease Phenotyping

Tianyu Lin, Jooyoung Ryu, Puvada Sreevar, Rahul Srinivasaraga, Riya Satavlekar, Susan Kim, Nidhi Soley, Yujie Yan, Ishan Vatsaraj, Carl Harris, Aimon Rahman, Vishal Patel, Joseph Greenstein, Casey Taylor, Kemar Green

Under review at npj Digital Medicine 2025

Building a saccade screening tool without any private patient data

ProjectPaper
Learning Segmentation from Radiology Reports

Learning Segmentation from Radiology Reports

Pedro R. A. S. Bassi, Wenxuan Li, Jieneng Chen, Zheren Zhu, Tianyu Lin, Sergio Decherchi, Andrea Cavalli, Kang Wang, Yang Yang, Alan L. Yuille, Zongwei Zhou

Medical Image Computing and Computer Assisted Intervention (MICCAI 2025) 2025

🏆 Best Paper Award Runner-up (top 2 in 1,027 papers)

PaperCodearXiv
LEAF: Latent Diffusion with Efficient Encoder Distillation for Aligned Features in Medical Image Segmentation

LEAF: Latent Diffusion with Efficient Encoder Distillation for Aligned Features in Medical Image Segmentation

Qilin Huang, Tianyu Lin, Zhiguang Chen, Fudan Zheng

International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2025) 2025

ProjectPaperCodearXiv
RadFabric: Agentic AI System with Reasoning Capability for Radiology

RadFabric: Agentic AI System with Reasoning Capability for Radiology

Wenting Chen, Yi Dong, Zhaojun Ding, Yucheng Shi, Yifan Zhou, Fang Zeng, Yijun Luo, Tianyu Lin, Yihang Su, Yichen Wu, Kai Zhang, Zhen Xiang, Tianming Liu, Ninghao Liu, Lichao Sun, Yixuan Yuan, Xiang Li

arXiv preprint arXiv:2506.14142 2025

ProjectCodearXiv
See More, Change Less: Anatomy-Aware Diffusion for Contrast Enhancement

See More, Change Less: Anatomy-Aware Diffusion for Contrast Enhancement

Junqi Liu, Zejun Wu, Pedro R. A. S. Bassi, Xinze Zhou, Wenxuan Li, Ibrahim E. Hamamci, Sezgin Er, Tianyu Lin, Yi Luo, Szymon Płotka, Bjoern Menze, Daguang Xu, Kai Ding, Kang Wang, Yang Yang, Yucheng Tang, Alan L. Yuille, Zongwei Zhou

arXiv preprint arXiv:2512.07251 2025

ProjectCodearXiv
Stable diffusion segmentation for biomedical images with single-step reverse process

Stable diffusion segmentation for biomedical images with single-step reverse process

Tianyu Lin, Zhiguang Chen, Zhonghao Yan, Weijiang Yu, Fudan Zheng

International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2024) 2024

A single-step latent space diffusion segmentation model

ProjectPaperCodearXiv

CAFS: An Attention-Based Co-Segmentation Semi-Supervised Method for Nasopharyngeal Carcinoma Segmentation

Yitong Chen, Guanghui Han, Tianyu Lin, Xiujian Liu

Sensors 2022